WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F18G5.2a.1 Sequence Name  F18G5.2a.1
Length (nt)  1674   Chromosome Location  X: 9251927-9255778
Chromosome . Primary Identifier  X Chromosome Location . Start  9251927
Chromosome Location . End  9255778 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F18G5.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003981 pes-8 F18G5.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F18G5.2a F18G5.2a 1395   X: 9251970-9252057

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F18G5.2a.1 9251927 9255778 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon244036   131   X: 9251927-9252057 Caenorhabditis elegans
Exon244037   163   X: 9252873-9253035 Caenorhabditis elegans
Exon244039   106   X: 9253091-9253196 Caenorhabditis elegans
Exon244041   54   X: 9253241-9253294 Caenorhabditis elegans
Exon244043   109   X: 9253516-9253624 Caenorhabditis elegans
Exon244045   135   X: 9253709-9253843 Caenorhabditis elegans
Exon244046   130   X: 9254146-9254275 Caenorhabditis elegans
Exon244049   103   X: 9254486-9254588 Caenorhabditis elegans
Exon244051   164   X: 9254844-9255007 Caenorhabditis elegans
Exon244053   237   X: 9255056-9255292 Caenorhabditis elegans
Exon244055   342   X: 9255437-9255778 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F18G5.2a.1 9251927 9255778 1

1 Sequence

Length
1674

1 Sequence Ontology Term

Identifier Name Description
transcript