WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T20B5.2.1 Sequence Name  T20B5.2.1
Length (nt)  1034   Chromosome Location  X: 9331162-9336632
Chromosome . Primary Identifier  X Chromosome Location . Start  9331162
Chromosome Location . End  9336632 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T20B5.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020595 T20B5.2 T20B5.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T20B5.2 T20B5.2 717   X: 9331240-9331275

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T20B5.2.1 9331162 9336632 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon244221   114   X: 9331162-9331275 Caenorhabditis elegans
Exon244222   72   X: 9331901-9331972 Caenorhabditis elegans
Exon244223   93   X: 9332198-9332290 Caenorhabditis elegans
Exon244224   87   X: 9333984-9334070 Caenorhabditis elegans
Exon244225   88   X: 9334229-9334316 Caenorhabditis elegans
Exon244226   134   X: 9335105-9335238 Caenorhabditis elegans
Exon244227   113   X: 9336132-9336244 Caenorhabditis elegans
Exon244228   333   X: 9336300-9336632 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T20B5.2.1 9331162 9336632 1

1 Sequence

Length
1034

1 Sequence Ontology Term

Identifier Name Description
transcript