WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:E01H11.1e Sequence Name  E01H11.1e
Length (nt)  2256   Chromosome Location  X: 9376271-9376356
Chromosome . Primary Identifier  X Chromosome Location . Start  9376271
Chromosome Location . End  9376356
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
E01H11.1e

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE53481 PKC-2, isoform e 85.6 751 Caenorhabditis elegans
 

Other

11 RNAi

WormBase ID
WBRNAi00001855
WBRNAi00043577
WBRNAi00043578
WBRNAi00109213
WBRNAi00116144
WBRNAi00012630
WBRNAi00109601
WBRNAi00027698
WBRNAi00109310
WBRNAi00109504
WBRNAi00109407

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:E01H11.1e 9376271 9376356 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004033 pkc-2 E01H11.1 Caenorhabditis elegans

14 Locations


Feature . Primary Identifier
Start End Strand
CDS:E01H11.1e 9376271 9376356 1
CDS:E01H11.1e 9376536 9376702 1
CDS:E01H11.1e 9380052 9380121 1
CDS:E01H11.1e 9380340 9380440 1
CDS:E01H11.1e 9380582 9380664 1
CDS:E01H11.1e 9380737 9380977 1
CDS:E01H11.1e 9381132 9381291 1
CDS:E01H11.1e 9381338 9381578 1
CDS:E01H11.1e 9381624 9381944 1
CDS:E01H11.1e 9382224 9382427 1
CDS:E01H11.1e 9382476 9382686 1
CDS:E01H11.1e 9382734 9382873 1
CDS:E01H11.1e 9383014 9383091 1
CDS:E01H11.1e 9385574 9385726 1

1 Sequence

Length
2256

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:E01H11.1e.1 E01H11.1e.1 2727   X: 9376118-9386044