WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:E01H11.1c.1 Sequence Name  E01H11.1c.1
Length (nt)  2302   Chromosome Location  X: 9376271-9383664
Chromosome . Primary Identifier  X Chromosome Location . Start  9376271
Chromosome Location . End  9383664 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
E01H11.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004033 pkc-2 E01H11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:E01H11.1c E01H11.1c 2262   X: 9376271-9376356

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:E01H11.1c.1 9376271 9383664 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon244277   86   X: 9376271-9376356 Caenorhabditis elegans
Exon244278   167   X: 9376536-9376702 Caenorhabditis elegans
Exon244283   70   X: 9380052-9380121 Caenorhabditis elegans
Exon244289   101   X: 9380340-9380440 Caenorhabditis elegans
Exon244295   83   X: 9380582-9380664 Caenorhabditis elegans
Exon244301   241   X: 9380737-9380977 Caenorhabditis elegans
Exon244307   160   X: 9381132-9381291 Caenorhabditis elegans
Exon244313   241   X: 9381338-9381578 Caenorhabditis elegans
Exon244319   321   X: 9381624-9381944 Caenorhabditis elegans
Exon244325   204   X: 9382224-9382427 Caenorhabditis elegans
Exon244331   211   X: 9382476-9382686 Caenorhabditis elegans
Exon244337   140   X: 9382734-9382873 Caenorhabditis elegans
Exon244343   78   X: 9383014-9383091 Caenorhabditis elegans
Exon244348   199   X: 9383466-9383664 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:E01H11.1c.1 9376271 9383664 1

1 Sequence

Length
2302

1 Sequence Ontology Term

Identifier Name Description
transcript