WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C23F12.1a.1 Sequence Name  C23F12.1a.1
Length (nt)  11450   Chromosome Location  X: 9397701-9427246
Chromosome . Primary Identifier  X Chromosome Location . Start  9397701
Chromosome Location . End  9427246 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C23F12.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016006 fln-2 C23F12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C23F12.1a C23F12.1a 10836   X: 9397752-9397832

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C23F12.1a.1 9397701 9427246 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

51 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon244370   132   X: 9397701-9397832 Caenorhabditis elegans
Exon244380   327   X: 9398769-9399095 Caenorhabditis elegans
Exon244389   312   X: 9399139-9399450 Caenorhabditis elegans
Exon244398   154   X: 9399577-9399730 Caenorhabditis elegans
Exon244407   81   X: 9399777-9399857 Caenorhabditis elegans
Exon244416   83   X: 9400033-9400115 Caenorhabditis elegans
Exon244425   64   X: 9400239-9400302 Caenorhabditis elegans
Exon244434   113   X: 9400560-9400672 Caenorhabditis elegans
Exon244445   225   X: 9403316-9403540 Caenorhabditis elegans
Exon244454   87   X: 9403587-9403673 Caenorhabditis elegans
Exon244464   90   X: 9404060-9404149 Caenorhabditis elegans
Exon244474   189   X: 9405291-9405479 Caenorhabditis elegans
Exon244486   133   X: 9405923-9406055 Caenorhabditis elegans
Exon244499   65   X: 9406343-9406407 Caenorhabditis elegans
Exon244512   108   X: 9406488-9406595 Caenorhabditis elegans
Exon244526   142   X: 9407160-9407301 Caenorhabditis elegans
Exon244541   147   X: 9407352-9407498 Caenorhabditis elegans
Exon244556   84   X: 9407820-9407903 Caenorhabditis elegans
Exon244569   150   X: 9409794-9409943 Caenorhabditis elegans
Exon244587   119   X: 9412247-9412365 Caenorhabditis elegans
Exon244608   107   X: 9412809-9412915 Caenorhabditis elegans
Exon244630   275   X: 9413129-9413403 Caenorhabditis elegans
Exon244654   72   X: 9413864-9413935 Caenorhabditis elegans
Exon244680   91   X: 9414413-9414503 Caenorhabditis elegans
Exon244704   77   X: 9414716-9414792 Caenorhabditis elegans
Exon244730   96   X: 9414993-9415088 Caenorhabditis elegans
Exon244756   176   X: 9415451-9415626 Caenorhabditis elegans
Exon244784   200   X: 9416289-9416488 Caenorhabditis elegans
Exon244812   93   X: 9416755-9416847 Caenorhabditis elegans
Exon244828   1631   X: 9416924-9418554 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C23F12.1a.1 9397701 9427246 1

1 Sequence

Length
11450

1 Sequence Ontology Term

Identifier Name Description
transcript