WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C23F12.1r.1 Sequence Name  C23F12.1r.1
Length (nt)  9774   Chromosome Location  X: 9397752-9426683
Chromosome . Primary Identifier  X Chromosome Location . Start  9397752
Chromosome Location . End  9426683 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C23F12.1r.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016006 fln-2 C23F12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C23F12.1r C23F12.1r 9774   X: 9397752-9397832

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C23F12.1r.1 9397752 9426683 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

47 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon244371   81   X: 9397752-9397832 Caenorhabditis elegans
Exon244382   327   X: 9398769-9399095 Caenorhabditis elegans
Exon244391   312   X: 9399139-9399450 Caenorhabditis elegans
Exon244400   154   X: 9399577-9399730 Caenorhabditis elegans
Exon244409   81   X: 9399777-9399857 Caenorhabditis elegans
Exon244418   83   X: 9400033-9400115 Caenorhabditis elegans
Exon244427   64   X: 9400239-9400302 Caenorhabditis elegans
Exon244436   113   X: 9400560-9400672 Caenorhabditis elegans
Exon244447   225   X: 9403316-9403540 Caenorhabditis elegans
Exon244456   87   X: 9403587-9403673 Caenorhabditis elegans
Exon244466   90   X: 9404060-9404149 Caenorhabditis elegans
Exon244477   189   X: 9405291-9405479 Caenorhabditis elegans
Exon244492   133   X: 9405923-9406055 Caenorhabditis elegans
Exon244505   65   X: 9406343-9406407 Caenorhabditis elegans
Exon244518   108   X: 9406488-9406595 Caenorhabditis elegans
Exon244532   142   X: 9407160-9407301 Caenorhabditis elegans
Exon244549   147   X: 9407352-9407498 Caenorhabditis elegans
Exon244564   84   X: 9407820-9407903 Caenorhabditis elegans
Exon244577   150   X: 9409794-9409943 Caenorhabditis elegans
Exon244599   119   X: 9412247-9412365 Caenorhabditis elegans
Exon244623   107   X: 9412809-9412915 Caenorhabditis elegans
Exon244645   275   X: 9413129-9413403 Caenorhabditis elegans
Exon244671   72   X: 9413864-9413935 Caenorhabditis elegans
Exon244697   91   X: 9414413-9414503 Caenorhabditis elegans
Exon244723   77   X: 9414716-9414792 Caenorhabditis elegans
Exon244749   96   X: 9414993-9415088 Caenorhabditis elegans
Exon244775   176   X: 9415451-9415626 Caenorhabditis elegans
Exon244805   200   X: 9416289-9416488 Caenorhabditis elegans
Exon244824   93   X: 9416755-9416847 Caenorhabditis elegans
Exon244849   1631   X: 9416924-9418554 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C23F12.1r.1 9397752 9426683 1

1 Sequence

Length
9774

1 Sequence Ontology Term

Identifier Name Description
transcript