WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C23F12.1u.1 Sequence Name  C23F12.1u.1
Length (nt)  9690   Chromosome Location  X: 9397752-9426683
Chromosome . Primary Identifier  X Chromosome Location . Start  9397752
Chromosome Location . End  9426683 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C23F12.1u.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016006 fln-2 C23F12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C23F12.1u C23F12.1u 9690   X: 9397752-9397832

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C23F12.1u.1 9397752 9426683 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

46 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon244374   81   X: 9397752-9397832 Caenorhabditis elegans
Exon244385   327   X: 9398769-9399095 Caenorhabditis elegans
Exon244394   312   X: 9399139-9399450 Caenorhabditis elegans
Exon244403   154   X: 9399577-9399730 Caenorhabditis elegans
Exon244412   81   X: 9399777-9399857 Caenorhabditis elegans
Exon244421   83   X: 9400033-9400115 Caenorhabditis elegans
Exon244430   64   X: 9400239-9400302 Caenorhabditis elegans
Exon244439   113   X: 9400560-9400672 Caenorhabditis elegans
Exon244450   225   X: 9403316-9403540 Caenorhabditis elegans
Exon244459   87   X: 9403587-9403673 Caenorhabditis elegans
Exon244469   90   X: 9404060-9404149 Caenorhabditis elegans
Exon244480   189   X: 9405291-9405479 Caenorhabditis elegans
Exon244495   133   X: 9405923-9406055 Caenorhabditis elegans
Exon244508   65   X: 9406343-9406407 Caenorhabditis elegans
Exon244521   108   X: 9406488-9406595 Caenorhabditis elegans
Exon244535   142   X: 9407160-9407301 Caenorhabditis elegans
Exon244552   147   X: 9407352-9407498 Caenorhabditis elegans
Exon244580   150   X: 9409794-9409943 Caenorhabditis elegans
Exon244602   119   X: 9412247-9412365 Caenorhabditis elegans
Exon244626   107   X: 9412809-9412915 Caenorhabditis elegans
Exon244648   275   X: 9413129-9413403 Caenorhabditis elegans
Exon244674   72   X: 9413864-9413935 Caenorhabditis elegans
Exon244700   91   X: 9414413-9414503 Caenorhabditis elegans
Exon244726   77   X: 9414716-9414792 Caenorhabditis elegans
Exon244752   96   X: 9414993-9415088 Caenorhabditis elegans
Exon244778   176   X: 9415451-9415626 Caenorhabditis elegans
Exon244808   200   X: 9416289-9416488 Caenorhabditis elegans
Exon244826   93   X: 9416755-9416847 Caenorhabditis elegans
Exon244852   1631   X: 9416924-9418554 Caenorhabditis elegans
Exon244882   255   X: 9418609-9418863 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C23F12.1u.1 9397752 9426683 1

1 Sequence

Length
9690

1 Sequence Ontology Term

Identifier Name Description
transcript