WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F12B6.1a.1 Sequence Name  F12B6.1a.1
Length (nt)  6672   Chromosome Location  I: 2255921-2272866
Chromosome . Primary Identifier  I Chromosome Location . Start  2255921
Chromosome Location . End  2272866 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F12B6.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000020 abt-2 F12B6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F12B6.1a F12B6.1a 6441   I: 2256152-2256328

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F12B6.1a.1 2255921 2272866 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

33 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon4071   408   I: 2255921-2256328 Caenorhabditis elegans
Exon4073   519   I: 2257052-2257570 Caenorhabditis elegans
Exon4075   151   I: 2257619-2257769 Caenorhabditis elegans
Exon4077   318   I: 2258515-2258832 Caenorhabditis elegans
Exon4079   157   I: 2258880-2259036 Caenorhabditis elegans
Exon4081   133   I: 2259084-2259216 Caenorhabditis elegans
Exon4083   264   I: 2259256-2259519 Caenorhabditis elegans
Exon4085   260   I: 2260370-2260629 Caenorhabditis elegans
Exon4087   338   I: 2261076-2261413 Caenorhabditis elegans
Exon4089   140   I: 2261459-2261598 Caenorhabditis elegans
Exon4091   124   I: 2261661-2261784 Caenorhabditis elegans
Exon4093   87   I: 2262351-2262437 Caenorhabditis elegans
Exon4095   370   I: 2262480-2262849 Caenorhabditis elegans
Exon4097   216   I: 2264236-2264451 Caenorhabditis elegans
Exon4099   140   I: 2264523-2264662 Caenorhabditis elegans
Exon4101   132   I: 2264713-2264844 Caenorhabditis elegans
Exon4103   83   I: 2265487-2265569 Caenorhabditis elegans
Exon4105   92   I: 2265620-2265711 Caenorhabditis elegans
Exon4107   319   I: 2265757-2266075 Caenorhabditis elegans
Exon4109   143   I: 2266904-2267046 Caenorhabditis elegans
Exon4111   187   I: 2267095-2267281 Caenorhabditis elegans
Exon4113   106   I: 2267329-2267434 Caenorhabditis elegans
Exon4115   103   I: 2267648-2267750 Caenorhabditis elegans
Exon4117   99   I: 2267799-2267897 Caenorhabditis elegans
Exon4119   127   I: 2268804-2268930 Caenorhabditis elegans
Exon4121   216   I: 2268976-2269191 Caenorhabditis elegans
Exon4123   117   I: 2269239-2269355 Caenorhabditis elegans
Exon4127   187   I: 2270205-2270391 Caenorhabditis elegans
Exon4129   221   I: 2270443-2270663 Caenorhabditis elegans
Exon4131   481   I: 2271637-2272117 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F12B6.1a.1 2255921 2272866 -1

1 Sequence

Length
6672

1 Sequence Ontology Term

Identifier Name Description
transcript