WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F12B6.1b.1 Sequence Name  F12B6.1b.1
Length (nt)  6330   Chromosome Location  I: 2256152-2272755
Chromosome . Primary Identifier  I Chromosome Location . Start  2256152
Chromosome Location . End  2272755 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F12B6.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000020 abt-2 F12B6.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F12B6.1b F12B6.1b 6330   I: 2256152-2256328

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F12B6.1b.1 2256152 2272755 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

33 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon4072   177   I: 2256152-2256328 Caenorhabditis elegans
Exon4074   519   I: 2257052-2257570 Caenorhabditis elegans
Exon4076   151   I: 2257619-2257769 Caenorhabditis elegans
Exon4078   318   I: 2258515-2258832 Caenorhabditis elegans
Exon4080   157   I: 2258880-2259036 Caenorhabditis elegans
Exon4082   133   I: 2259084-2259216 Caenorhabditis elegans
Exon4084   264   I: 2259256-2259519 Caenorhabditis elegans
Exon4086   260   I: 2260370-2260629 Caenorhabditis elegans
Exon4088   338   I: 2261076-2261413 Caenorhabditis elegans
Exon4090   140   I: 2261459-2261598 Caenorhabditis elegans
Exon4092   124   I: 2261661-2261784 Caenorhabditis elegans
Exon4094   87   I: 2262351-2262437 Caenorhabditis elegans
Exon4096   370   I: 2262480-2262849 Caenorhabditis elegans
Exon4098   216   I: 2264236-2264451 Caenorhabditis elegans
Exon4100   140   I: 2264523-2264662 Caenorhabditis elegans
Exon4102   132   I: 2264713-2264844 Caenorhabditis elegans
Exon4104   83   I: 2265487-2265569 Caenorhabditis elegans
Exon4106   92   I: 2265620-2265711 Caenorhabditis elegans
Exon4108   319   I: 2265757-2266075 Caenorhabditis elegans
Exon4110   143   I: 2266904-2267046 Caenorhabditis elegans
Exon4112   187   I: 2267095-2267281 Caenorhabditis elegans
Exon4114   106   I: 2267329-2267434 Caenorhabditis elegans
Exon4116   103   I: 2267648-2267750 Caenorhabditis elegans
Exon4118   99   I: 2267799-2267897 Caenorhabditis elegans
Exon4120   127   I: 2268804-2268930 Caenorhabditis elegans
Exon4122   216   I: 2268976-2269191 Caenorhabditis elegans
Exon4124   117   I: 2269239-2269355 Caenorhabditis elegans
Exon4128   187   I: 2270205-2270391 Caenorhabditis elegans
Exon4130   221   I: 2270443-2270663 Caenorhabditis elegans
Exon4132   481   I: 2271637-2272117 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F12B6.1b.1 2256152 2272755 -1

1 Sequence

Length
6330

1 Sequence Ontology Term

Identifier Name Description
transcript