WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C23F12.1v.1 Sequence Name  C23F12.1v.1
Length (nt)  10659   Chromosome Location  X: 9397752-9426683
Chromosome . Primary Identifier  X Chromosome Location . Start  9397752
Chromosome Location . End  9426683 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C23F12.1v.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016006 fln-2 C23F12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C23F12.1v C23F12.1v 10659   X: 9397752-9397832

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C23F12.1v.1 9397752 9426683 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

49 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon244375   81   X: 9397752-9397832 Caenorhabditis elegans
Exon244386   327   X: 9398769-9399095 Caenorhabditis elegans
Exon244395   312   X: 9399139-9399450 Caenorhabditis elegans
Exon244404   154   X: 9399577-9399730 Caenorhabditis elegans
Exon244413   81   X: 9399777-9399857 Caenorhabditis elegans
Exon244422   83   X: 9400033-9400115 Caenorhabditis elegans
Exon244431   64   X: 9400239-9400302 Caenorhabditis elegans
Exon244440   113   X: 9400560-9400672 Caenorhabditis elegans
Exon244451   225   X: 9403316-9403540 Caenorhabditis elegans
Exon244460   87   X: 9403587-9403673 Caenorhabditis elegans
Exon244470   90   X: 9404060-9404149 Caenorhabditis elegans
Exon244481   189   X: 9405291-9405479 Caenorhabditis elegans
Exon244496   133   X: 9405923-9406055 Caenorhabditis elegans
Exon244509   65   X: 9406343-9406407 Caenorhabditis elegans
Exon244522   108   X: 9406488-9406595 Caenorhabditis elegans
Exon244536   142   X: 9407160-9407301 Caenorhabditis elegans
Exon244553   147   X: 9407352-9407498 Caenorhabditis elegans
Exon244581   150   X: 9409794-9409943 Caenorhabditis elegans
Exon244603   119   X: 9412247-9412365 Caenorhabditis elegans
Exon244627   107   X: 9412809-9412915 Caenorhabditis elegans
Exon244649   275   X: 9413129-9413403 Caenorhabditis elegans
Exon244675   72   X: 9413864-9413935 Caenorhabditis elegans
Exon244701   91   X: 9414413-9414503 Caenorhabditis elegans
Exon244727   77   X: 9414716-9414792 Caenorhabditis elegans
Exon244753   96   X: 9414993-9415088 Caenorhabditis elegans
Exon244779   176   X: 9415451-9415626 Caenorhabditis elegans
Exon244809   200   X: 9416289-9416488 Caenorhabditis elegans
Exon244853   1631   X: 9416924-9418554 Caenorhabditis elegans
Exon244883   255   X: 9418609-9418863 Caenorhabditis elegans
Exon244912   183   X: 9418914-9419096 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C23F12.1v.1 9397752 9426683 1

1 Sequence

Length
10659

1 Sequence Ontology Term

Identifier Name Description
transcript