WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C23F12.1e.1 Sequence Name  C23F12.1e.1
Length (nt)  10241   Chromosome Location  X: 9397752-9427243
Chromosome . Primary Identifier  X Chromosome Location . Start  9397752
Chromosome Location . End  9427243 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C23F12.1e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016006 fln-2 C23F12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C23F12.1e C23F12.1e 9681   X: 9397752-9397832

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C23F12.1e.1 9397752 9427243 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

46 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon244378   81   X: 9397752-9397832 Caenorhabditis elegans
Exon244381   327   X: 9398769-9399095 Caenorhabditis elegans
Exon244390   312   X: 9399139-9399450 Caenorhabditis elegans
Exon244399   154   X: 9399577-9399730 Caenorhabditis elegans
Exon244408   81   X: 9399777-9399857 Caenorhabditis elegans
Exon244417   83   X: 9400033-9400115 Caenorhabditis elegans
Exon244426   64   X: 9400239-9400302 Caenorhabditis elegans
Exon244435   113   X: 9400560-9400672 Caenorhabditis elegans
Exon244446   225   X: 9403316-9403540 Caenorhabditis elegans
Exon244455   87   X: 9403587-9403673 Caenorhabditis elegans
Exon244465   90   X: 9404060-9404149 Caenorhabditis elegans
Exon244475   189   X: 9405291-9405479 Caenorhabditis elegans
Exon244487   133   X: 9405923-9406055 Caenorhabditis elegans
Exon244500   65   X: 9406343-9406407 Caenorhabditis elegans
Exon244513   108   X: 9406488-9406595 Caenorhabditis elegans
Exon244527   142   X: 9407160-9407301 Caenorhabditis elegans
Exon244542   147   X: 9407352-9407498 Caenorhabditis elegans
Exon244557   84   X: 9407820-9407903 Caenorhabditis elegans
Exon244570   150   X: 9409794-9409943 Caenorhabditis elegans
Exon244590   119   X: 9412247-9412365 Caenorhabditis elegans
Exon244611   107   X: 9412809-9412915 Caenorhabditis elegans
Exon244633   275   X: 9413129-9413403 Caenorhabditis elegans
Exon244657   72   X: 9413864-9413935 Caenorhabditis elegans
Exon244683   91   X: 9414413-9414503 Caenorhabditis elegans
Exon244707   77   X: 9414716-9414792 Caenorhabditis elegans
Exon244733   96   X: 9414993-9415088 Caenorhabditis elegans
Exon244759   176   X: 9415451-9415626 Caenorhabditis elegans
Exon244787   200   X: 9416289-9416488 Caenorhabditis elegans
Exon244831   1631   X: 9416924-9418554 Caenorhabditis elegans
Exon244860   255   X: 9418609-9418863 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C23F12.1e.1 9397752 9427243 1

1 Sequence

Length
10241

1 Sequence Ontology Term

Identifier Name Description
transcript