WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C23F12.1h.1 Sequence Name  C23F12.1h.1
Length (nt)  9120   Chromosome Location  X: 9405390-9426683
Chromosome . Primary Identifier  X Chromosome Location . Start  9405390
Chromosome Location . End  9426683 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C23F12.1h.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016006 fln-2 C23F12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C23F12.1h C23F12.1h 9120   X: 9405390-9405479

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C23F12.1h.1 9405390 9426683 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

40 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon244484   90   X: 9405390-9405479 Caenorhabditis elegans
Exon244490   133   X: 9405923-9406055 Caenorhabditis elegans
Exon244503   65   X: 9406343-9406407 Caenorhabditis elegans
Exon244516   108   X: 9406488-9406595 Caenorhabditis elegans
Exon244530   142   X: 9407160-9407301 Caenorhabditis elegans
Exon244545   147   X: 9407352-9407498 Caenorhabditis elegans
Exon244560   84   X: 9407820-9407903 Caenorhabditis elegans
Exon244573   150   X: 9409794-9409943 Caenorhabditis elegans
Exon244595   119   X: 9412247-9412365 Caenorhabditis elegans
Exon244617   107   X: 9412809-9412915 Caenorhabditis elegans
Exon244639   275   X: 9413129-9413403 Caenorhabditis elegans
Exon244663   72   X: 9413864-9413935 Caenorhabditis elegans
Exon244689   91   X: 9414413-9414503 Caenorhabditis elegans
Exon244715   77   X: 9414716-9414792 Caenorhabditis elegans
Exon244741   96   X: 9414993-9415088 Caenorhabditis elegans
Exon244767   176   X: 9415451-9415626 Caenorhabditis elegans
Exon244795   200   X: 9416289-9416488 Caenorhabditis elegans
Exon244819   93   X: 9416755-9416847 Caenorhabditis elegans
Exon244839   1631   X: 9416924-9418554 Caenorhabditis elegans
Exon244869   255   X: 9418609-9418863 Caenorhabditis elegans
Exon244898   183   X: 9418914-9419096 Caenorhabditis elegans
Exon244927   203   X: 9419378-9419580 Caenorhabditis elegans
Exon244956   127   X: 9420406-9420532 Caenorhabditis elegans
Exon244985   222   X: 9420710-9420931 Caenorhabditis elegans
Exon245014   168   X: 9420979-9421146 Caenorhabditis elegans
Exon245043   111   X: 9421193-9421303 Caenorhabditis elegans
Exon245072   264   X: 9421372-9421635 Caenorhabditis elegans
Exon245101   480   X: 9421746-9422225 Caenorhabditis elegans
Exon245121   81   X: 9422384-9422464 Caenorhabditis elegans
Exon245133   123   X: 9422512-9422634 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C23F12.1h.1 9405390 9426683 1

1 Sequence

Length
9120

1 Sequence Ontology Term

Identifier Name Description
transcript