WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39G10AR.21a.1 Sequence Name  Y39G10AR.21a.1
Length (nt)  1483   Chromosome Location  I: 2308976-2312129
Chromosome . Primary Identifier  I Chromosome Location . Start  2308976
Chromosome Location . End  2312129 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39G10AR.21a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021476 nsun-4 Y39G10AR.21 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39G10AR.21a Y39G10AR.21a 1398   I: 2308977-2309209

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y39G10AR.21a.1 2308976 2312129 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon4203   234   I: 2308976-2309209 Caenorhabditis elegans
Exon4204   160   I: 2309517-2309676 Caenorhabditis elegans
Exon4206   522   I: 2309726-2310247 Caenorhabditis elegans
Exon4208   203   I: 2310854-2311056 Caenorhabditis elegans
Exon4210   76   I: 2311099-2311174 Caenorhabditis elegans
Exon4213   288   I: 2311842-2312129 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y39G10AR.21a.1 2308976 2312129 1

1 Sequence

Length
1483

1 Sequence Ontology Term

Identifier Name Description
transcript