WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39G10AR.7b.1 Sequence Name  Y39G10AR.7b.1
Length (nt)  1797   Chromosome Location  I: 2316307-2318305
Chromosome . Primary Identifier  I Chromosome Location . Start  2316307
Chromosome Location . End  2318305 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39G10AR.7b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021465 ekl-7 Y39G10AR.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39G10AR.7b Y39G10AR.7b 1431   I: 2316309-2316389

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y39G10AR.7b.1 2316307 2318305 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon4224   83   I: 2316307-2316389 Caenorhabditis elegans
Exon4226   148   I: 2316440-2316587 Caenorhabditis elegans
Exon4229   523   I: 2316647-2317169 Caenorhabditis elegans
Exon4231   129   I: 2317215-2317343 Caenorhabditis elegans
Exon4233   914   I: 2317392-2318305 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y39G10AR.7b.1 2316307 2318305 1

1 Sequence

Length
1797

1 Sequence Ontology Term

Identifier Name Description
transcript