WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C23F12.1j.1 Sequence Name  C23F12.1j.1
Length (nt)  8595   Chromosome Location  X: 9407289-9426683
Chromosome . Primary Identifier  X Chromosome Location . Start  9407289
Chromosome Location . End  9426683 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C23F12.1j.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016006 fln-2 C23F12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C23F12.1j C23F12.1j 8595   X: 9407289-9407301

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C23F12.1j.1 9407289 9426683 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

36 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon244539   13   X: 9407289-9407301 Caenorhabditis elegans
Exon244547   147   X: 9407352-9407498 Caenorhabditis elegans
Exon244562   84   X: 9407820-9407903 Caenorhabditis elegans
Exon244575   150   X: 9409794-9409943 Caenorhabditis elegans
Exon244597   119   X: 9412247-9412365 Caenorhabditis elegans
Exon244619   107   X: 9412809-9412915 Caenorhabditis elegans
Exon244641   275   X: 9413129-9413403 Caenorhabditis elegans
Exon244665   72   X: 9413864-9413935 Caenorhabditis elegans
Exon244691   91   X: 9414413-9414503 Caenorhabditis elegans
Exon244717   77   X: 9414716-9414792 Caenorhabditis elegans
Exon244743   96   X: 9414993-9415088 Caenorhabditis elegans
Exon244769   176   X: 9415451-9415626 Caenorhabditis elegans
Exon244797   200   X: 9416289-9416488 Caenorhabditis elegans
Exon244820   93   X: 9416755-9416847 Caenorhabditis elegans
Exon244841   1631   X: 9416924-9418554 Caenorhabditis elegans
Exon244871   255   X: 9418609-9418863 Caenorhabditis elegans
Exon244900   183   X: 9418914-9419096 Caenorhabditis elegans
Exon244929   203   X: 9419378-9419580 Caenorhabditis elegans
Exon244958   127   X: 9420406-9420532 Caenorhabditis elegans
Exon244987   222   X: 9420710-9420931 Caenorhabditis elegans
Exon245016   168   X: 9420979-9421146 Caenorhabditis elegans
Exon245045   111   X: 9421193-9421303 Caenorhabditis elegans
Exon245074   264   X: 9421372-9421635 Caenorhabditis elegans
Exon245103   480   X: 9421746-9422225 Caenorhabditis elegans
Exon245122   81   X: 9422384-9422464 Caenorhabditis elegans
Exon245134   123   X: 9422512-9422634 Caenorhabditis elegans
Exon245146   711   X: 9422771-9423481 Caenorhabditis elegans
Exon245158   147   X: 9423532-9423678 Caenorhabditis elegans
Exon245180   225   X: 9423947-9424171 Caenorhabditis elegans
Exon245209   177   X: 9424224-9424400 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C23F12.1j.1 9407289 9426683 1

1 Sequence

Length
8595

1 Sequence Ontology Term

Identifier Name Description
transcript