WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C23F12.1g.4 Sequence Name  C23F12.1g.4
Length (nt)  7743   Chromosome Location  X: 9409787-9427223
Chromosome . Primary Identifier  X Chromosome Location . Start  9409787
Chromosome Location . End  9427223 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C23F12.1g.4

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016006 fln-2 C23F12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C23F12.1g C23F12.1g 5670   X: 9417087-9418554

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C23F12.1g.4 9409787 9427223 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

28 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon244568   157   X: 9409787-9409943 Caenorhabditis elegans
Exon244594   119   X: 9412247-9412365 Caenorhabditis elegans
Exon244615   107   X: 9412809-9412915 Caenorhabditis elegans
Exon244637   275   X: 9413129-9413403 Caenorhabditis elegans
Exon244661   72   X: 9413864-9413935 Caenorhabditis elegans
Exon244687   91   X: 9414413-9414503 Caenorhabditis elegans
Exon244711   77   X: 9414716-9414792 Caenorhabditis elegans
Exon244737   96   X: 9414993-9415088 Caenorhabditis elegans
Exon244763   176   X: 9415451-9415626 Caenorhabditis elegans
Exon244791   200   X: 9416289-9416488 Caenorhabditis elegans
Exon244835   1631   X: 9416924-9418554 Caenorhabditis elegans
Exon244865   255   X: 9418609-9418863 Caenorhabditis elegans
Exon244894   183   X: 9418914-9419096 Caenorhabditis elegans
Exon244923   203   X: 9419378-9419580 Caenorhabditis elegans
Exon244952   127   X: 9420406-9420532 Caenorhabditis elegans
Exon244981   222   X: 9420710-9420931 Caenorhabditis elegans
Exon245010   168   X: 9420979-9421146 Caenorhabditis elegans
Exon245039   111   X: 9421193-9421303 Caenorhabditis elegans
Exon245068   264   X: 9421372-9421635 Caenorhabditis elegans
Exon245097   480   X: 9421746-9422225 Caenorhabditis elegans
Exon245174   225   X: 9423947-9424171 Caenorhabditis elegans
Exon245203   177   X: 9424224-9424400 Caenorhabditis elegans
Exon245232   414   X: 9424473-9424886 Caenorhabditis elegans
Exon245261   118   X: 9424937-9425054 Caenorhabditis elegans
Exon245290   147   X: 9425174-9425320 Caenorhabditis elegans
Exon245319   657   X: 9425372-9426028 Caenorhabditis elegans
Exon245348   166   X: 9426076-9426241 Caenorhabditis elegans
Exon245388   825   X: 9426399-9427223 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C23F12.1g.4 9409787 9427223 1

1 Sequence

Length
7743

1 Sequence Ontology Term

Identifier Name Description
transcript