WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39G10AR.5.1 Sequence Name  Y39G10AR.5.1
Length (nt)  2989   Chromosome Location  I: 2342216-2350536
Chromosome . Primary Identifier  I Chromosome Location . Start  2342216
Chromosome Location . End  2350536 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39G10AR.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021463 zeel-1 Y39G10AR.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39G10AR.5 Y39G10AR.5 2754   I: 2342383-2342407

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y39G10AR.5.1 2342216 2350536 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon4269   192   I: 2342216-2342407 Caenorhabditis elegans
Exon4270   186   I: 2342520-2342705 Caenorhabditis elegans
Exon4271   162   I: 2344100-2344261 Caenorhabditis elegans
Exon4272   126   I: 2345098-2345223 Caenorhabditis elegans
Exon4273   117   I: 2345268-2345384 Caenorhabditis elegans
Exon4274   102   I: 2346368-2346469 Caenorhabditis elegans
Exon4275   168   I: 2346549-2346716 Caenorhabditis elegans
Exon4276   128   I: 2346764-2346891 Caenorhabditis elegans
Exon4277   266   I: 2347478-2347743 Caenorhabditis elegans
Exon4278   155   I: 2347791-2347945 Caenorhabditis elegans
Exon4279   313   I: 2347992-2348304 Caenorhabditis elegans
Exon4280   603   I: 2349049-2349651 Caenorhabditis elegans
Exon4281   471   I: 2350066-2350536 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y39G10AR.5.1 2342216 2350536 1

1 Sequence

Length
2989

1 Sequence Ontology Term

Identifier Name Description
transcript