WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C23F12.1c.1 Sequence Name  C23F12.1c.1
Length (nt)  8331   Chromosome Location  X: 9409814-9426683
Chromosome . Primary Identifier  X Chromosome Location . Start  9409814
Chromosome Location . End  9426683 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C23F12.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016006 fln-2 C23F12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C23F12.1c C23F12.1c 8331   X: 9409814-9409943

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C23F12.1c.1 9409814 9426683 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

33 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon244584   130   X: 9409814-9409943 Caenorhabditis elegans
Exon244588   119   X: 9412247-9412365 Caenorhabditis elegans
Exon244609   107   X: 9412809-9412915 Caenorhabditis elegans
Exon244631   275   X: 9413129-9413403 Caenorhabditis elegans
Exon244655   72   X: 9413864-9413935 Caenorhabditis elegans
Exon244681   91   X: 9414413-9414503 Caenorhabditis elegans
Exon244705   77   X: 9414716-9414792 Caenorhabditis elegans
Exon244731   96   X: 9414993-9415088 Caenorhabditis elegans
Exon244757   176   X: 9415451-9415626 Caenorhabditis elegans
Exon244785   200   X: 9416289-9416488 Caenorhabditis elegans
Exon244813   93   X: 9416755-9416847 Caenorhabditis elegans
Exon244829   1631   X: 9416924-9418554 Caenorhabditis elegans
Exon244858   255   X: 9418609-9418863 Caenorhabditis elegans
Exon244887   183   X: 9418914-9419096 Caenorhabditis elegans
Exon244916   203   X: 9419378-9419580 Caenorhabditis elegans
Exon244945   127   X: 9420406-9420532 Caenorhabditis elegans
Exon244974   222   X: 9420710-9420931 Caenorhabditis elegans
Exon245003   168   X: 9420979-9421146 Caenorhabditis elegans
Exon245032   111   X: 9421193-9421303 Caenorhabditis elegans
Exon245061   264   X: 9421372-9421635 Caenorhabditis elegans
Exon245090   480   X: 9421746-9422225 Caenorhabditis elegans
Exon245119   81   X: 9422384-9422464 Caenorhabditis elegans
Exon245131   123   X: 9422512-9422634 Caenorhabditis elegans
Exon245143   711   X: 9422771-9423481 Caenorhabditis elegans
Exon245155   147   X: 9423532-9423678 Caenorhabditis elegans
Exon245167   225   X: 9423947-9424171 Caenorhabditis elegans
Exon245196   177   X: 9424224-9424400 Caenorhabditis elegans
Exon245225   414   X: 9424473-9424886 Caenorhabditis elegans
Exon245254   118   X: 9424937-9425054 Caenorhabditis elegans
Exon245283   147   X: 9425174-9425320 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C23F12.1c.1 9409814 9426683 1

1 Sequence

Length
8331

1 Sequence Ontology Term

Identifier Name Description
transcript