WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C23F12.1d.1 Sequence Name  C23F12.1d.1
Length (nt)  7739   Chromosome Location  X: 9409814-9427246
Chromosome . Primary Identifier  X Chromosome Location . Start  9409814
Chromosome Location . End  9427246 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C23F12.1d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016006 fln-2 C23F12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C23F12.1d C23F12.1d 7176   X: 9409814-9409943

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C23F12.1d.1 9409814 9427246 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

28 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon244585   130   X: 9409814-9409943 Caenorhabditis elegans
Exon244589   119   X: 9412247-9412365 Caenorhabditis elegans
Exon244610   107   X: 9412809-9412915 Caenorhabditis elegans
Exon244632   275   X: 9413129-9413403 Caenorhabditis elegans
Exon244656   72   X: 9413864-9413935 Caenorhabditis elegans
Exon244682   91   X: 9414413-9414503 Caenorhabditis elegans
Exon244706   77   X: 9414716-9414792 Caenorhabditis elegans
Exon244732   96   X: 9414993-9415088 Caenorhabditis elegans
Exon244758   176   X: 9415451-9415626 Caenorhabditis elegans
Exon244786   200   X: 9416289-9416488 Caenorhabditis elegans
Exon244830   1631   X: 9416924-9418554 Caenorhabditis elegans
Exon244859   255   X: 9418609-9418863 Caenorhabditis elegans
Exon244888   183   X: 9418914-9419096 Caenorhabditis elegans
Exon244917   203   X: 9419378-9419580 Caenorhabditis elegans
Exon244946   127   X: 9420406-9420532 Caenorhabditis elegans
Exon244975   222   X: 9420710-9420931 Caenorhabditis elegans
Exon245004   168   X: 9420979-9421146 Caenorhabditis elegans
Exon245033   111   X: 9421193-9421303 Caenorhabditis elegans
Exon245062   264   X: 9421372-9421635 Caenorhabditis elegans
Exon245091   480   X: 9421746-9422225 Caenorhabditis elegans
Exon245168   225   X: 9423947-9424171 Caenorhabditis elegans
Exon245197   177   X: 9424224-9424400 Caenorhabditis elegans
Exon245226   414   X: 9424473-9424886 Caenorhabditis elegans
Exon245255   118   X: 9424937-9425054 Caenorhabditis elegans
Exon245284   147   X: 9425174-9425320 Caenorhabditis elegans
Exon245313   657   X: 9425372-9426028 Caenorhabditis elegans
Exon245342   166   X: 9426076-9426241 Caenorhabditis elegans
Exon245392   848   X: 9426399-9427246 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C23F12.1d.1 9409814 9427246 1

1 Sequence

Length
7739

1 Sequence Ontology Term

Identifier Name Description
transcript