WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C23F12.1g.5 Sequence Name  C23F12.1g.5
Length (nt)  7711   Chromosome Location  X: 9412245-9427253
Chromosome . Primary Identifier  X Chromosome Location . Start  9412245
Chromosome Location . End  9427253 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C23F12.1g.5

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016006 fln-2 C23F12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C23F12.1g C23F12.1g 5670   X: 9417087-9418554

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C23F12.1g.5 9412245 9427253 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

28 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon244586   121   X: 9412245-9412365 Caenorhabditis elegans
Exon244616   107   X: 9412809-9412915 Caenorhabditis elegans
Exon244638   275   X: 9413129-9413403 Caenorhabditis elegans
Exon244662   72   X: 9413864-9413935 Caenorhabditis elegans
Exon244688   91   X: 9414413-9414503 Caenorhabditis elegans
Exon244712   77   X: 9414716-9414792 Caenorhabditis elegans
Exon244738   96   X: 9414993-9415088 Caenorhabditis elegans
Exon244764   176   X: 9415451-9415626 Caenorhabditis elegans
Exon244792   200   X: 9416289-9416488 Caenorhabditis elegans
Exon244817   93   X: 9416755-9416847 Caenorhabditis elegans
Exon244836   1631   X: 9416924-9418554 Caenorhabditis elegans
Exon244866   255   X: 9418609-9418863 Caenorhabditis elegans
Exon244895   183   X: 9418914-9419096 Caenorhabditis elegans
Exon244924   203   X: 9419378-9419580 Caenorhabditis elegans
Exon244953   127   X: 9420406-9420532 Caenorhabditis elegans
Exon244982   222   X: 9420710-9420931 Caenorhabditis elegans
Exon245011   168   X: 9420979-9421146 Caenorhabditis elegans
Exon245040   111   X: 9421193-9421303 Caenorhabditis elegans
Exon245069   264   X: 9421372-9421635 Caenorhabditis elegans
Exon245098   480   X: 9421746-9422225 Caenorhabditis elegans
Exon245175   225   X: 9423947-9424171 Caenorhabditis elegans
Exon245204   177   X: 9424224-9424400 Caenorhabditis elegans
Exon245233   414   X: 9424473-9424886 Caenorhabditis elegans
Exon245262   118   X: 9424937-9425054 Caenorhabditis elegans
Exon245291   147   X: 9425174-9425320 Caenorhabditis elegans
Exon245320   657   X: 9425372-9426028 Caenorhabditis elegans
Exon245349   166   X: 9426076-9426241 Caenorhabditis elegans
Exon245396   855   X: 9426399-9427253 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C23F12.1g.5 9412245 9427253 1

1 Sequence

Length
7711

1 Sequence Ontology Term

Identifier Name Description
transcript