WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C23F12.1m.1 Sequence Name  C23F12.1m.1
Length (nt)  7008   Chromosome Location  X: 9412285-9426683
Chromosome . Primary Identifier  X Chromosome Location . Start  9412285
Chromosome Location . End  9426683 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C23F12.1m.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016006 fln-2 C23F12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C23F12.1m C23F12.1m 7008   X: 9412285-9412365

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C23F12.1m.1 9412285 9426683 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

27 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon244607   81   X: 9412285-9412365 Caenorhabditis elegans
Exon244622   107   X: 9412809-9412915 Caenorhabditis elegans
Exon244644   275   X: 9413129-9413403 Caenorhabditis elegans
Exon244668   72   X: 9413864-9413935 Caenorhabditis elegans
Exon244694   91   X: 9414413-9414503 Caenorhabditis elegans
Exon244720   77   X: 9414716-9414792 Caenorhabditis elegans
Exon244746   96   X: 9414993-9415088 Caenorhabditis elegans
Exon244772   176   X: 9415451-9415626 Caenorhabditis elegans
Exon244800   200   X: 9416289-9416488 Caenorhabditis elegans
Exon244844   1631   X: 9416924-9418554 Caenorhabditis elegans
Exon244874   255   X: 9418609-9418863 Caenorhabditis elegans
Exon244903   183   X: 9418914-9419096 Caenorhabditis elegans
Exon244932   203   X: 9419378-9419580 Caenorhabditis elegans
Exon244961   127   X: 9420406-9420532 Caenorhabditis elegans
Exon244990   222   X: 9420710-9420931 Caenorhabditis elegans
Exon245019   168   X: 9420979-9421146 Caenorhabditis elegans
Exon245048   111   X: 9421193-9421303 Caenorhabditis elegans
Exon245077   264   X: 9421372-9421635 Caenorhabditis elegans
Exon245106   480   X: 9421746-9422225 Caenorhabditis elegans
Exon245183   225   X: 9423947-9424171 Caenorhabditis elegans
Exon245212   177   X: 9424224-9424400 Caenorhabditis elegans
Exon245241   414   X: 9424473-9424886 Caenorhabditis elegans
Exon245270   118   X: 9424937-9425054 Caenorhabditis elegans
Exon245299   147   X: 9425174-9425320 Caenorhabditis elegans
Exon245328   657   X: 9425372-9426028 Caenorhabditis elegans
Exon245357   166   X: 9426076-9426241 Caenorhabditis elegans
Exon245376   285   X: 9426399-9426683 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C23F12.1m.1 9412285 9426683 1

1 Sequence

Length
7008

1 Sequence Ontology Term

Identifier Name Description
transcript