WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C23F12.1n.1 Sequence Name  C23F12.1n.1
Length (nt)  7971   Chromosome Location  X: 9413133-9426683
Chromosome . Primary Identifier  X Chromosome Location . Start  9413133
Chromosome Location . End  9426683 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C23F12.1n.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016006 fln-2 C23F12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C23F12.1n C23F12.1n 7971   X: 9413133-9413403

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C23F12.1n.1 9413133 9426683 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

30 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon244652   271   X: 9413133-9413403 Caenorhabditis elegans
Exon244669   72   X: 9413864-9413935 Caenorhabditis elegans
Exon244695   91   X: 9414413-9414503 Caenorhabditis elegans
Exon244721   77   X: 9414716-9414792 Caenorhabditis elegans
Exon244747   96   X: 9414993-9415088 Caenorhabditis elegans
Exon244773   176   X: 9415451-9415626 Caenorhabditis elegans
Exon244801   200   X: 9416289-9416488 Caenorhabditis elegans
Exon244822   93   X: 9416755-9416847 Caenorhabditis elegans
Exon244845   1631   X: 9416924-9418554 Caenorhabditis elegans
Exon244875   255   X: 9418609-9418863 Caenorhabditis elegans
Exon244904   183   X: 9418914-9419096 Caenorhabditis elegans
Exon244933   203   X: 9419378-9419580 Caenorhabditis elegans
Exon244962   127   X: 9420406-9420532 Caenorhabditis elegans
Exon244991   222   X: 9420710-9420931 Caenorhabditis elegans
Exon245020   168   X: 9420979-9421146 Caenorhabditis elegans
Exon245049   111   X: 9421193-9421303 Caenorhabditis elegans
Exon245078   264   X: 9421372-9421635 Caenorhabditis elegans
Exon245107   480   X: 9421746-9422225 Caenorhabditis elegans
Exon245124   81   X: 9422384-9422464 Caenorhabditis elegans
Exon245136   123   X: 9422512-9422634 Caenorhabditis elegans
Exon245148   711   X: 9422771-9423481 Caenorhabditis elegans
Exon245160   147   X: 9423532-9423678 Caenorhabditis elegans
Exon245184   225   X: 9423947-9424171 Caenorhabditis elegans
Exon245213   177   X: 9424224-9424400 Caenorhabditis elegans
Exon245242   414   X: 9424473-9424886 Caenorhabditis elegans
Exon245271   118   X: 9424937-9425054 Caenorhabditis elegans
Exon245300   147   X: 9425174-9425320 Caenorhabditis elegans
Exon245329   657   X: 9425372-9426028 Caenorhabditis elegans
Exon245358   166   X: 9426076-9426241 Caenorhabditis elegans
Exon245377   285   X: 9426399-9426683 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C23F12.1n.1 9413133 9426683 1

1 Sequence

Length
7971

1 Sequence Ontology Term

Identifier Name Description
transcript