WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C23F12.1p.1 Sequence Name  C23F12.1p.1
Length (nt)  7248   Chromosome Location  X: 9415567-9426683
Chromosome . Primary Identifier  X Chromosome Location . Start  9415567
Chromosome Location . End  9426683 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C23F12.1p.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016006 fln-2 C23F12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C23F12.1p C23F12.1p 7248   X: 9415567-9415626

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C23F12.1p.1 9415567 9426683 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

25 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon244782   60   X: 9415567-9415626 Caenorhabditis elegans
Exon244803   200   X: 9416289-9416488 Caenorhabditis elegans
Exon244823   93   X: 9416755-9416847 Caenorhabditis elegans
Exon244847   1631   X: 9416924-9418554 Caenorhabditis elegans
Exon244877   255   X: 9418609-9418863 Caenorhabditis elegans
Exon244906   183   X: 9418914-9419096 Caenorhabditis elegans
Exon244935   203   X: 9419378-9419580 Caenorhabditis elegans
Exon244964   127   X: 9420406-9420532 Caenorhabditis elegans
Exon244993   222   X: 9420710-9420931 Caenorhabditis elegans
Exon245022   168   X: 9420979-9421146 Caenorhabditis elegans
Exon245051   111   X: 9421193-9421303 Caenorhabditis elegans
Exon245080   264   X: 9421372-9421635 Caenorhabditis elegans
Exon245109   480   X: 9421746-9422225 Caenorhabditis elegans
Exon245125   81   X: 9422384-9422464 Caenorhabditis elegans
Exon245137   123   X: 9422512-9422634 Caenorhabditis elegans
Exon245149   711   X: 9422771-9423481 Caenorhabditis elegans
Exon245161   147   X: 9423532-9423678 Caenorhabditis elegans
Exon245186   225   X: 9423947-9424171 Caenorhabditis elegans
Exon245215   177   X: 9424224-9424400 Caenorhabditis elegans
Exon245244   414   X: 9424473-9424886 Caenorhabditis elegans
Exon245273   118   X: 9424937-9425054 Caenorhabditis elegans
Exon245302   147   X: 9425174-9425320 Caenorhabditis elegans
Exon245331   657   X: 9425372-9426028 Caenorhabditis elegans
Exon245360   166   X: 9426076-9426241 Caenorhabditis elegans
Exon245379   285   X: 9426399-9426683 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C23F12.1p.1 9415567 9426683 1

1 Sequence

Length
7248

1 Sequence Ontology Term

Identifier Name Description
transcript