WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C23F12.1q.1 Sequence Name  C23F12.1q.1
Length (nt)  6093   Chromosome Location  X: 9415567-9426683
Chromosome . Primary Identifier  X Chromosome Location . Start  9415567
Chromosome Location . End  9426683 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C23F12.1q.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016006 fln-2 C23F12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C23F12.1q C23F12.1q 6093   X: 9415567-9415626

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C23F12.1q.1 9415567 9426683 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon244783   60   X: 9415567-9415626 Caenorhabditis elegans
Exon244804   200   X: 9416289-9416488 Caenorhabditis elegans
Exon244848   1631   X: 9416924-9418554 Caenorhabditis elegans
Exon244878   255   X: 9418609-9418863 Caenorhabditis elegans
Exon244907   183   X: 9418914-9419096 Caenorhabditis elegans
Exon244936   203   X: 9419378-9419580 Caenorhabditis elegans
Exon244965   127   X: 9420406-9420532 Caenorhabditis elegans
Exon244994   222   X: 9420710-9420931 Caenorhabditis elegans
Exon245023   168   X: 9420979-9421146 Caenorhabditis elegans
Exon245052   111   X: 9421193-9421303 Caenorhabditis elegans
Exon245081   264   X: 9421372-9421635 Caenorhabditis elegans
Exon245110   480   X: 9421746-9422225 Caenorhabditis elegans
Exon245187   225   X: 9423947-9424171 Caenorhabditis elegans
Exon245216   177   X: 9424224-9424400 Caenorhabditis elegans
Exon245245   414   X: 9424473-9424886 Caenorhabditis elegans
Exon245274   118   X: 9424937-9425054 Caenorhabditis elegans
Exon245303   147   X: 9425174-9425320 Caenorhabditis elegans
Exon245332   657   X: 9425372-9426028 Caenorhabditis elegans
Exon245361   166   X: 9426076-9426241 Caenorhabditis elegans
Exon245380   285   X: 9426399-9426683 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C23F12.1q.1 9415567 9426683 1

1 Sequence

Length
6093

1 Sequence Ontology Term

Identifier Name Description
transcript