WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y23H5A.5d.2 Sequence Name  Y23H5A.5d.2
Length (nt)  2655   Chromosome Location  I: 2606753-2617360
Chromosome . Primary Identifier  I Chromosome Location . Start  2606753
Chromosome Location . End  2617360 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y23H5A.5d.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000832 ctn-1 Y23H5A.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y23H5A.5d Y23H5A.5d 2355   I: 2606783-2606932

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y23H5A.5d.2 2606753 2617360 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon4724   180   I: 2606753-2606932 Caenorhabditis elegans
Exon4731   84   I: 2607212-2607295 Caenorhabditis elegans
Exon4737   121   I: 2608188-2608308 Caenorhabditis elegans
Exon4743   167   I: 2608861-2609027 Caenorhabditis elegans
Exon4749   420   I: 2609889-2610308 Caenorhabditis elegans
Exon4755   438   I: 2611371-2611808 Caenorhabditis elegans
Exon4761   93   I: 2611863-2611955 Caenorhabditis elegans
Exon4767   93   I: 2612003-2612095 Caenorhabditis elegans
Exon4772   99   I: 2612788-2612886 Caenorhabditis elegans
Exon4778   51   I: 2613334-2613384 Caenorhabditis elegans
Exon4783   471   I: 2614019-2614489 Caenorhabditis elegans
Exon4791   78   I: 2615077-2615154 Caenorhabditis elegans
Exon4796   90   I: 2615848-2615937 Caenorhabditis elegans
Exon4804   270   I: 2617091-2617360 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y23H5A.5d.2 2606753 2617360 1

1 Sequence

Length
2655

1 Sequence Ontology Term

Identifier Name Description
transcript