WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK899.4.1 Sequence Name  ZK899.4.1
Length (nt)  1569   Chromosome Location  X: 9455485-9458348
Chromosome . Primary Identifier  X Chromosome Location . Start  9455485
Chromosome Location . End  9458348 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK899.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006534 tba-8 ZK899.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK899.4 ZK899.4 1359   X: 9455562-9455609

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK899.4.1 9455485 9458348 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon245444   125   X: 9455485-9455609 Caenorhabditis elegans
Exon245445   68   X: 9455673-9455740 Caenorhabditis elegans
Exon245446   124   X: 9455892-9456015 Caenorhabditis elegans
Exon245447   73   X: 9456093-9456165 Caenorhabditis elegans
Exon245448   98   X: 9456211-9456308 Caenorhabditis elegans
Exon245449   99   X: 9456355-9456453 Caenorhabditis elegans
Exon245450   72   X: 9456574-9456645 Caenorhabditis elegans
Exon245451   108   X: 9456695-9456802 Caenorhabditis elegans
Exon245452   151   X: 9456848-9456998 Caenorhabditis elegans
Exon245453   134   X: 9457047-9457180 Caenorhabditis elegans
Exon245454   369   X: 9457781-9458149 Caenorhabditis elegans
Exon245455   148   X: 9458201-9458348 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK899.4.1 9455485 9458348 -1

1 Sequence

Length
1569

1 Sequence Ontology Term

Identifier Name Description
transcript