WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK899.8e.1 Sequence Name  ZK899.8e.1
Length (nt)  3164   Chromosome Location  X: 9487380-9515889
Chromosome . Primary Identifier  X Chromosome Location . Start  9487380
Chromosome Location . End  9515889 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK899.8e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001516 gap-2 ZK899.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK899.8e ZK899.8e 3147   X: 9487397-9487442

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK899.8e.1 9487380 9515889 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon245504   63   X: 9487380-9487442 Caenorhabditis elegans
Exon245513   221   X: 9496541-9496761 Caenorhabditis elegans
Exon245529   92   X: 9498111-9498202 Caenorhabditis elegans
Exon245544   173   X: 9502841-9503013 Caenorhabditis elegans
Exon245557   121   X: 9503911-9504031 Caenorhabditis elegans
Exon245573   201   X: 9510525-9510725 Caenorhabditis elegans
Exon245587   135   X: 9511028-9511162 Caenorhabditis elegans
Exon245603   226   X: 9513131-9513356 Caenorhabditis elegans
Exon245619   344   X: 9513420-9513763 Caenorhabditis elegans
Exon245635   339   X: 9513812-9514150 Caenorhabditis elegans
Exon245651   261   X: 9514304-9514564 Caenorhabditis elegans
Exon245667   375   X: 9514709-9515083 Caenorhabditis elegans
Exon245683   193   X: 9515137-9515329 Caenorhabditis elegans
Exon245699   170   X: 9515374-9515543 Caenorhabditis elegans
Exon245715   157   X: 9515589-9515745 Caenorhabditis elegans
Exon245729   93   X: 9515797-9515889 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK899.8e.1 9487380 9515889 1

1 Sequence

Length
3164

1 Sequence Ontology Term

Identifier Name Description
transcript