WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK899.8h.1 Sequence Name  ZK899.8h.1
Length (nt)  4198   Chromosome Location  X: 9495032-9516440
Chromosome . Primary Identifier  X Chromosome Location . Start  9495032
Chromosome Location . End  9516440 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK899.8h.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001516 gap-2 ZK899.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK899.8h ZK899.8h 3267   X: 9495412-9495517

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:ZK899.8h.1 9495032 9516440 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon245506   486   X: 9495032-9495517 Caenorhabditis elegans
Exon245514   221   X: 9496541-9496761 Caenorhabditis elegans
Exon245521   60   X: 9497668-9497727 Caenorhabditis elegans
Exon245530   92   X: 9498111-9498202 Caenorhabditis elegans
Exon245546   173   X: 9502841-9503013 Caenorhabditis elegans
Exon245559   121   X: 9503911-9504031 Caenorhabditis elegans
Exon245575   201   X: 9510525-9510725 Caenorhabditis elegans
Exon245589   135   X: 9511028-9511162 Caenorhabditis elegans
Exon245606   226   X: 9513131-9513356 Caenorhabditis elegans
Exon245622   344   X: 9513420-9513763 Caenorhabditis elegans
Exon245638   339   X: 9513812-9514150 Caenorhabditis elegans
Exon245654   261   X: 9514304-9514564 Caenorhabditis elegans
Exon245670   375   X: 9514709-9515083 Caenorhabditis elegans
Exon245686   193   X: 9515137-9515329 Caenorhabditis elegans
Exon245702   170   X: 9515374-9515543 Caenorhabditis elegans
Exon245718   157   X: 9515589-9515745 Caenorhabditis elegans
Exon245738   644   X: 9515797-9516440 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:ZK899.8h.1 9495032 9516440 1

1 Sequence

Length
4198

1 Sequence Ontology Term

Identifier Name Description
transcript