WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C07B5.4a.1 Sequence Name  C07B5.4a.1
Length (nt)  1804   Chromosome Location  X: 9529660-9536631
Chromosome . Primary Identifier  X Chromosome Location . Start  9529660
Chromosome Location . End  9536631 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C07B5.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007409 C07B5.4 C07B5.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C07B5.4a C07B5.4a 1548   X: 9529726-9529764

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C07B5.4a.1 9529660 9536631 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon245731   105   X: 9529660-9529764 Caenorhabditis elegans
Exon245734   119   X: 9531971-9532089 Caenorhabditis elegans
Exon245738   74   X: 9532578-9532651 Caenorhabditis elegans
Exon245742   121   X: 9533748-9533868 Caenorhabditis elegans
Exon245746   139   X: 9533913-9534051 Caenorhabditis elegans
Exon245750   154   X: 9534094-9534247 Caenorhabditis elegans
Exon245754   233   X: 9534322-9534554 Caenorhabditis elegans
Exon245758   280   X: 9534606-9534885 Caenorhabditis elegans
Exon245762   134   X: 9535523-9535656 Caenorhabditis elegans
Exon245764   121   X: 9535703-9535823 Caenorhabditis elegans
Exon245767   59   X: 9535875-9535933 Caenorhabditis elegans
Exon245772   265   X: 9536367-9536631 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C07B5.4a.1 9529660 9536631 1

1 Sequence

Length
1804

1 Sequence Ontology Term

Identifier Name Description
transcript