WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C07B5.4b.1 Sequence Name  C07B5.4b.1
Length (nt)  2457   Chromosome Location  X: 9531629-9536568
Chromosome . Primary Identifier  X Chromosome Location . Start  9531629
Chromosome Location . End  9536568 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C07B5.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007409 C07B5.4 C07B5.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C07B5.4b C07B5.4b 1167   X: 9532067-9532089

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C07B5.4b.1 9531629 9536568 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon245733   184   X: 9531629-9531812 Caenorhabditis elegans
Exon245735   119   X: 9531971-9532089 Caenorhabditis elegans
Exon245739   74   X: 9532578-9532651 Caenorhabditis elegans
Exon245743   121   X: 9533748-9533868 Caenorhabditis elegans
Exon245747   139   X: 9533913-9534051 Caenorhabditis elegans
Exon245751   154   X: 9534094-9534247 Caenorhabditis elegans
Exon245755   233   X: 9534322-9534554 Caenorhabditis elegans
Exon245761   1051   X: 9534606-9535656 Caenorhabditis elegans
Exon245765   121   X: 9535703-9535823 Caenorhabditis elegans
Exon245768   59   X: 9535875-9535933 Caenorhabditis elegans
Exon245771   202   X: 9536367-9536568 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C07B5.4b.1 9531629 9536568 1

1 Sequence

Length
2457

1 Sequence Ontology Term

Identifier Name Description
transcript