WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F49E2.5w.1 Sequence Name  F49E2.5w.1
Length (nt)  3267   Chromosome Location  X: 9552835-9560800
Chromosome . Primary Identifier  X Chromosome Location . Start  9552835
Chromosome Location . End  9560800 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49E2.5w.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009888 F49E2.5 F49E2.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F49E2.5w F49E2.5w 2289   X: 9552891-9553000

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F49E2.5w.1 9552835 9560800 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon245791   166   X: 9552835-9553000 Caenorhabditis elegans
Exon245845   88   X: 9553049-9553136 Caenorhabditis elegans
Exon245874   432   X: 9553451-9553882 Caenorhabditis elegans
Exon245903   222   X: 9553937-9554158 Caenorhabditis elegans
Exon246028   90   X: 9556628-9556717 Caenorhabditis elegans
Exon246054   69   X: 9556766-9556834 Caenorhabditis elegans
Exon246088   189   X: 9557218-9557406 Caenorhabditis elegans
Exon246114   156   X: 9557795-9557950 Caenorhabditis elegans
Exon246140   424   X: 9558259-9558682 Caenorhabditis elegans
Exon246166   140   X: 9558956-9559095 Caenorhabditis elegans
Exon246192   120   X: 9559227-9559346 Caenorhabditis elegans
Exon246218   90   X: 9559478-9559567 Caenorhabditis elegans
Exon246244   75   X: 9559617-9559691 Caenorhabditis elegans
Exon246269   1006   X: 9559795-9560800 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F49E2.5w.1 9552835 9560800 1

1 Sequence

Length
3267

1 Sequence Ontology Term

Identifier Name Description
transcript