WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:W03D8.6e Sequence Name  W03D8.6e
Length (nt)  4362   Chromosome Location  I: 2805096-2805230
Chromosome . Primary Identifier  I Chromosome Location . Start  2805096
Chromosome Location . End  2805230
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W03D8.6e

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE50118 ITX-1, isoform e 161.9 1453 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00054687
WBRNAi00004392
WBRNAi00036229
WBRNAi00115344

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:W03D8.6e 2805096 2805230 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002174 itx-1 W03D8.6 Caenorhabditis elegans

27 Locations


Feature . Primary Identifier
Start End Strand
CDS:W03D8.6e 2805096 2805230 1
CDS:W03D8.6e 2805324 2805399 1
CDS:W03D8.6e 2805455 2805722 1
CDS:W03D8.6e 2805800 2806031 1
CDS:W03D8.6e 2806794 2806971 1
CDS:W03D8.6e 2807018 2807158 1
CDS:W03D8.6e 2807207 2807330 1
CDS:W03D8.6e 2807619 2807715 1
CDS:W03D8.6e 2808246 2808444 1
CDS:W03D8.6e 2808660 2808809 1
CDS:W03D8.6e 2808867 2808910 1
CDS:W03D8.6e 2808963 2809141 1
CDS:W03D8.6e 2809188 2809331 1
CDS:W03D8.6e 2810159 2810244 1
CDS:W03D8.6e 2810289 2810587 1
CDS:W03D8.6e 2810974 2811159 1
CDS:W03D8.6e 2811241 2811394 1
CDS:W03D8.6e 2811470 2811622 1
CDS:W03D8.6e 2811674 2812016 1
CDS:W03D8.6e 2812121 2812280 1
CDS:W03D8.6e 2812785 2812938 1
CDS:W03D8.6e 2813000 2813278 1
CDS:W03D8.6e 2813394 2813489 1
CDS:W03D8.6e 2813547 2813630 1
CDS:W03D8.6e 2813686 2813747 1
CDS:W03D8.6e 2814200 2814360 1
CDS:W03D8.6e 2815466 2815643 1

1 Sequence

Length
4362

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:W03D8.6e.1 W03D8.6e.1 4362   I: 2805096-2815643