WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C11E4.1.1 Sequence Name  C11E4.1.1
Length (nt)  906   Chromosome Location  X: 9584668-9586344
Chromosome . Primary Identifier  X Chromosome Location . Start  9584668
Chromosome Location . End  9586344 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C11E4.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007516 gpx-5 C11E4.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C11E4.1 C11E4.1 672   X: 9584695-9584752

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C11E4.1.1 9584668 9586344 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon246461   85   X: 9584668-9584752 Caenorhabditis elegans
Exon246462   74   X: 9584850-9584923 Caenorhabditis elegans
Exon246463   85   X: 9584973-9585057 Caenorhabditis elegans
Exon246464   245   X: 9585476-9585720 Caenorhabditis elegans
Exon246465   417   X: 9585928-9586344 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C11E4.1.1 9584668 9586344 1

1 Sequence

Length
906

1 Sequence Ontology Term

Identifier Name Description
transcript