WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C11E4.3a.1 Sequence Name  C11E4.3a.1
Length (nt)  1954   Chromosome Location  X: 9589423-9595713
Chromosome . Primary Identifier  X Chromosome Location . Start  9589423
Chromosome Location . End  9595713 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C11E4.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007518 del-8 C11E4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C11E4.3a C11E4.3a 1662   X: 9589461-9589496

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C11E4.3a.1 9589423 9595713 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon246448   74   X: 9589423-9589496 Caenorhabditis elegans
Exon246449   237   X: 9589722-9589958 Caenorhabditis elegans
Exon246451   134   X: 9590009-9590142 Caenorhabditis elegans
Exon246452   139   X: 9590185-9590323 Caenorhabditis elegans
Exon246453   144   X: 9590372-9590515 Caenorhabditis elegans
Exon246454   231   X: 9590948-9591178 Caenorhabditis elegans
Exon246456   201   X: 9591391-9591591 Caenorhabditis elegans
Exon246457   114   X: 9593925-9594038 Caenorhabditis elegans
Exon246458   61   X: 9594124-9594184 Caenorhabditis elegans
Exon246460   141   X: 9594237-9594377 Caenorhabditis elegans
Exon246463   478   X: 9595236-9595713 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C11E4.3a.1 9589423 9595713 1

1 Sequence

Length
1954

1 Sequence Ontology Term

Identifier Name Description
transcript