WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C43C3.2e.1 Sequence Name  C43C3.2e.1
Length (nt)  1431   Chromosome Location  X: 9693878-9696338
Chromosome . Primary Identifier  X Chromosome Location . Start  9693878
Chromosome Location . End  9696338 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C43C3.2e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008065 npr-18 C43C3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C43C3.2e C43C3.2e 1431   X: 9693878-9694252

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C43C3.2e.1 9693878 9696338 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon246609   375   X: 9693878-9694252 Caenorhabditis elegans
Exon246615   138   X: 9694300-9694437 Caenorhabditis elegans
Exon246619   102   X: 9694658-9694759 Caenorhabditis elegans
Exon246623   126   X: 9694853-9694978 Caenorhabditis elegans
Exon246627   194   X: 9695032-9695225 Caenorhabditis elegans
Exon246631   175   X: 9695268-9695442 Caenorhabditis elegans
Exon246635   112   X: 9695756-9695867 Caenorhabditis elegans
Exon246639   110   X: 9695918-9696027 Caenorhabditis elegans
Exon246642   99   X: 9696240-9696338 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C43C3.2e.1 9693878 9696338 1

1 Sequence

Length
1431

1 Sequence Ontology Term

Identifier Name Description
transcript