WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F15G9.4a.1 Sequence Name  F15G9.4a.1
Length (nt)  15720   Chromosome Location  X: 9717626-9753761
Chromosome . Primary Identifier  X Chromosome Location . Start  9717626
Chromosome Location . End  9753761 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F15G9.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001863 him-4 F15G9.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F15G9.4a F15G9.4a 15528   X: 9717626-9717878

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F15G9.4a.1 9717626 9753761 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

62 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon246723   253   X: 9717626-9717878 Caenorhabditis elegans
Exon246724   105   X: 9718376-9718480 Caenorhabditis elegans
Exon246729   644   X: 9719726-9720369 Caenorhabditis elegans
Exon246734   106   X: 9720451-9720556 Caenorhabditis elegans
Exon246739   322   X: 9720639-9720960 Caenorhabditis elegans
Exon246744   388   X: 9721113-9721500 Caenorhabditis elegans
Exon246749   172   X: 9721553-9721724 Caenorhabditis elegans
Exon246754   815   X: 9721808-9722622 Caenorhabditis elegans
Exon246759   124   X: 9722778-9722901 Caenorhabditis elegans
Exon246764   224   X: 9723064-9723287 Caenorhabditis elegans
Exon246769   399   X: 9723337-9723735 Caenorhabditis elegans
Exon246774   123   X: 9723913-9724035 Caenorhabditis elegans
Exon246779   783   X: 9724089-9724871 Caenorhabditis elegans
Exon246784   90   X: 9725124-9725213 Caenorhabditis elegans
Exon246789   88   X: 9725265-9725352 Caenorhabditis elegans
Exon246794   185   X: 9725411-9725595 Caenorhabditis elegans
Exon246799   103   X: 9725642-9725744 Caenorhabditis elegans
Exon246804   116   X: 9727241-9727356 Caenorhabditis elegans
Exon246809   109   X: 9727409-9727517 Caenorhabditis elegans
Exon246814   202   X: 9727646-9727847 Caenorhabditis elegans
Exon246819   160   X: 9727934-9728093 Caenorhabditis elegans
Exon246824   90   X: 9728142-9728231 Caenorhabditis elegans
Exon246829   961   X: 9728698-9729658 Caenorhabditis elegans
Exon246834   202   X: 9729827-9730028 Caenorhabditis elegans
Exon246839   380   X: 9730088-9730467 Caenorhabditis elegans
Exon246844   391   X: 9730719-9731109 Caenorhabditis elegans
Exon246849   244   X: 9731387-9731630 Caenorhabditis elegans
Exon246854   318   X: 9731904-9732221 Caenorhabditis elegans
Exon246860   178   X: 9732494-9732671 Caenorhabditis elegans
Exon246865   279   X: 9732718-9732996 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F15G9.4a.1 9717626 9753761 1

1 Sequence

Length
15720

1 Sequence Ontology Term

Identifier Name Description
transcript