WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y54E10A.17b Sequence Name  Y54E10A.17b
Length (nt)  597   Chromosome Location  I: 3206804-3206908
Chromosome . Primary Identifier  I Chromosome Location . Start  3206804
Chromosome Location . End  3206908
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54E10A.17b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE52119 Y54E10A.17, isoform b 21.0 198 Caenorhabditis elegans
 

Other

1 RNAi

WormBase ID
WBRNAi00057345

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y54E10A.17b 3206804 3206908 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021835 Y54E10A.17 Y54E10A.17 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y54E10A.17b 3206804 3206908 1
CDS:Y54E10A.17b 3207991 3208077 1
CDS:Y54E10A.17b 3208134 3208266 1
CDS:Y54E10A.17b 3208951 3209015 1
CDS:Y54E10A.17b 3209780 3209848 1
CDS:Y54E10A.17b 3210089 3210226 1

1 Sequence

Length
597

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y54E10A.17b.1 Y54E10A.17b.1 685   I: 3206762-3210272