WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T09B9.3.1 Sequence Name  T09B9.3.1
Length (nt)  1163   Chromosome Location  X: 9759297-9761366
Chromosome . Primary Identifier  X Chromosome Location . Start  9759297
Chromosome Location . End  9761366 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T09B9.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011644 T09B9.3 T09B9.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T09B9.3 T09B9.3 1023   X: 9759352-9759553

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T09B9.3.1 9759297 9761366 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon247010   257   X: 9759297-9759553 Caenorhabditis elegans
Exon247011   66   X: 9759600-9759665 Caenorhabditis elegans
Exon247012   112   X: 9759981-9760092 Caenorhabditis elegans
Exon247013   121   X: 9760135-9760255 Caenorhabditis elegans
Exon247014   100   X: 9760310-9760409 Caenorhabditis elegans
Exon247015   158   X: 9760454-9760611 Caenorhabditis elegans
Exon247016   93   X: 9760657-9760749 Caenorhabditis elegans
Exon247017   96   X: 9761061-9761156 Caenorhabditis elegans
Exon247018   160   X: 9761207-9761366 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T09B9.3.1 9759297 9761366 -1

1 Sequence

Length
1163

1 Sequence Ontology Term

Identifier Name Description
transcript