WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T09B9.2.1 Sequence Name  T09B9.2.1
Length (nt)  1912   Chromosome Location  X: 9761479-9764922
Chromosome . Primary Identifier  X Chromosome Location . Start  9761479
Chromosome Location . End  9764922 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T09B9.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011643 slc-17.9 T09B9.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T09B9.2 T09B9.2 1551   X: 9761837-9761977

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T09B9.2.1 9761479 9764922 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon247019   499   X: 9761479-9761977 Caenorhabditis elegans
Exon247020   103   X: 9762102-9762204 Caenorhabditis elegans
Exon247021   136   X: 9762288-9762423 Caenorhabditis elegans
Exon247022   141   X: 9762636-9762776 Caenorhabditis elegans
Exon247023   307   X: 9762827-9763133 Caenorhabditis elegans
Exon247024   173   X: 9763199-9763371 Caenorhabditis elegans
Exon247025   122   X: 9763534-9763655 Caenorhabditis elegans
Exon247026   175   X: 9764233-9764407 Caenorhabditis elegans
Exon247027   256   X: 9764667-9764922 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T09B9.2.1 9761479 9764922 -1

1 Sequence

Length
1912

1 Sequence Ontology Term

Identifier Name Description
transcript