WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T09B9.4.1 Sequence Name  T09B9.4.1
Length (nt)  2063   Chromosome Location  X: 9771697-9774352
Chromosome . Primary Identifier  X Chromosome Location . Start  9771697
Chromosome Location . End  9774352 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T09B9.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011645 T09B9.4 T09B9.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T09B9.4 T09B9.4 1587   X: 9772158-9772425

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T09B9.4.1 9771697 9774352 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon247031   729   X: 9771697-9772425 Caenorhabditis elegans
Exon247032   70   X: 9772472-9772541 Caenorhabditis elegans
Exon247033   230   X: 9772798-9773027 Caenorhabditis elegans
Exon247034   560   X: 9773074-9773633 Caenorhabditis elegans
Exon247035   334   X: 9773764-9774097 Caenorhabditis elegans
Exon247036   61   X: 9774167-9774227 Caenorhabditis elegans
Exon247037   79   X: 9774274-9774352 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T09B9.4.1 9771697 9774352 -1

1 Sequence

Length
2063

1 Sequence Ontology Term

Identifier Name Description
transcript