WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T09B9.5.1 Sequence Name  T09B9.5.1
Length (nt)  1326   Chromosome Location  X: 9777781-9780412
Chromosome . Primary Identifier  X Chromosome Location . Start  9777781
Chromosome Location . End  9780412 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T09B9.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011646 T09B9.5 T09B9.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T09B9.5 T09B9.5 1092   X: 9777854-9778027

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T09B9.5.1 9777781 9780412 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon247038   247   X: 9777781-9778027 Caenorhabditis elegans
Exon247039   203   X: 9778511-9778713 Caenorhabditis elegans
Exon247040   261   X: 9778771-9779031 Caenorhabditis elegans
Exon247041   136   X: 9779074-9779209 Caenorhabditis elegans
Exon247042   80   X: 9779288-9779367 Caenorhabditis elegans
Exon247043   113   X: 9779621-9779733 Caenorhabditis elegans
Exon247044   286   X: 9780127-9780412 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T09B9.5.1 9777781 9780412 1

1 Sequence

Length
1326

1 Sequence Ontology Term

Identifier Name Description
transcript