WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F47A4.3a Sequence Name  F47A4.3a
Length (nt)  2280   Chromosome Location  X: 9823964-9824052
Chromosome . Primary Identifier  X Chromosome Location . Start  9823964
Chromosome Location . End  9824052
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F47A4.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE34188 RRC-1, isoform a 87.0 759 Caenorhabditis elegans
 

Other

13 RNAi

WormBase ID
WBRNAi00001032
WBRNAi00047592
WBRNAi00111066
WBRNAi00015142
WBRNAi00015143
WBRNAi00109618
WBRNAi00032401
WBRNAi00109230
WBRNAi00109327
WBRNAi00081646
WBRNAi00097739
WBRNAi00109521
WBRNAi00109424

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F47A4.3a 9823964 9824052 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009800 rrc-1 F47A4.3 Caenorhabditis elegans

14 Locations


Feature . Primary Identifier
Start End Strand
CDS:F47A4.3a 9823964 9824052 -1
CDS:F47A4.3a 9824300 9824425 -1
CDS:F47A4.3a 9825003 9825180 -1
CDS:F47A4.3a 9825418 9825658 -1
CDS:F47A4.3a 9825705 9825912 -1
CDS:F47A4.3a 9825958 9826079 -1
CDS:F47A4.3a 9826333 9826668 -1
CDS:F47A4.3a 9826712 9827004 -1
CDS:F47A4.3a 9827485 9827613 -1
CDS:F47A4.3a 9827666 9827788 -1
CDS:F47A4.3a 9828588 9828671 -1
CDS:F47A4.3a 9828721 9828850 -1
CDS:F47A4.3a 9829086 9829235 -1
CDS:F47A4.3a 9831140 9831210 -1

1 Sequence

Length
2280

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F47A4.3a.1 F47A4.3a.1 2570   X: 9823752-9831288