WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W01B11.5b.3 Sequence Name  W01B11.5b.3
Length (nt)  1862   Chromosome Location  I: 3269397-3277661
Chromosome . Primary Identifier  I Chromosome Location . Start  3269397
Chromosome Location . End  3277661 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W01B11.5b.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004154 pqn-72 W01B11.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W01B11.5b W01B11.5b 1680   I: 3269573-3269811

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W01B11.5b.3 3269397 3277661 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon6320   415   I: 3269397-3269811 Caenorhabditis elegans
Exon6329   195   I: 3270170-3270364 Caenorhabditis elegans
Exon6335   117   I: 3270417-3270533 Caenorhabditis elegans
Exon6341   252   I: 3273028-3273279 Caenorhabditis elegans
Exon6347   69   I: 3273367-3273435 Caenorhabditis elegans
Exon6353   86   I: 3274078-3274163 Caenorhabditis elegans
Exon6358   537   I: 3274276-3274812 Caenorhabditis elegans
Exon6365   53   I: 3276666-3276718 Caenorhabditis elegans
Exon6371   51   I: 3276781-3276831 Caenorhabditis elegans
Exon6379   87   I: 3277575-3277661 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W01B11.5b.3 3269397 3277661 -1

1 Sequence

Length
1862

1 Sequence Ontology Term

Identifier Name Description
transcript