WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R07B1.1.1 Sequence Name  R07B1.1.1
Length (nt)  1386   Chromosome Location  X: 9847275-9849805
Chromosome . Primary Identifier  X Chromosome Location . Start  9847275
Chromosome Location . End  9849805 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R07B1.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006881 vab-15 R07B1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R07B1.1 R07B1.1 678   X: 9847291-9847499

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R07B1.1.1 9847275 9849805 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon247174   225   X: 9847275-9847499 Caenorhabditis elegans
Exon247175   113   X: 9847548-9847660 Caenorhabditis elegans
Exon247176   212   X: 9847712-9847923 Caenorhabditis elegans
Exon247177   836   X: 9848970-9849805 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R07B1.1.1 9847275 9849805 1

1 Sequence

Length
1386

1 Sequence Ontology Term

Identifier Name Description
transcript