WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y44E3A.2.1 Sequence Name  Y44E3A.2.1
Length (nt)  2985   Chromosome Location  I: 3301368-3307935
Chromosome . Primary Identifier  I Chromosome Location . Start  3301368
Chromosome Location . End  3307935 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y44E3A.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000036 ace-2 Y44E3A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y44E3A.2 Y44E3A.2 1890   I: 3302197-3302321

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y44E3A.2.1 3301368 3307935 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon6420   954   I: 3301368-3302321 Caenorhabditis elegans
Exon6422   161   I: 3302494-3302654 Caenorhabditis elegans
Exon6424   174   I: 3303168-3303341 Caenorhabditis elegans
Exon6426   425   I: 3303867-3304291 Caenorhabditis elegans
Exon6428   237   I: 3305177-3305413 Caenorhabditis elegans
Exon6430   229   I: 3305460-3305688 Caenorhabditis elegans
Exon6432   176   I: 3305944-3306119 Caenorhabditis elegans
Exon6434   204   I: 3306224-3306427 Caenorhabditis elegans
Exon6436   279   I: 3307307-3307585 Caenorhabditis elegans
Exon6439   146   I: 3307790-3307935 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y44E3A.2.1 3301368 3307935 -1

1 Sequence

Length
2985

1 Sequence Ontology Term

Identifier Name Description
transcript