WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R07B1.12.1 Sequence Name  R07B1.12.1
Length (nt)  760   Chromosome Location  X: 9872795-9882212
Chromosome . Primary Identifier  X Chromosome Location . Start  9872795
Chromosome Location . End  9882212 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R07B1.12.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011083 glo-1 R07B1.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R07B1.12 R07B1.12 639   X: 9872910-9873023

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R07B1.12.1 9872795 9882212 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon247253   229   X: 9872795-9873023 Caenorhabditis elegans
Exon247254   135   X: 9873897-9874031 Caenorhabditis elegans
Exon247255   182   X: 9874077-9874258 Caenorhabditis elegans
Exon247273   79   X: 9881508-9881586 Caenorhabditis elegans
Exon247274   135   X: 9882078-9882212 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R07B1.12.1 9872795 9882212 -1

1 Sequence

Length
760

1 Sequence Ontology Term

Identifier Name Description
transcript