WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C17G1.4a.1 Sequence Name  C17G1.4a.1
Length (nt)  3402   Chromosome Location  X: 9925728-9931460
Chromosome . Primary Identifier  X Chromosome Location . Start  9925728
Chromosome Location . End  9931460 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C17G1.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007651 nra-3 C17G1.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C17G1.4a C17G1.4a 2901   X: 9926221-9926394

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C17G1.4a.1 9925728 9931460 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon247507   667   X: 9925728-9926394 Caenorhabditis elegans
Exon247509   176   X: 9926839-9927014 Caenorhabditis elegans
Exon247511   357   X: 9927069-9927425 Caenorhabditis elegans
Exon247513   214   X: 9927480-9927693 Caenorhabditis elegans
Exon247515   87   X: 9928441-9928527 Caenorhabditis elegans
Exon247517   441   X: 9928572-9929012 Caenorhabditis elegans
Exon247519   1159   X: 9929903-9931061 Caenorhabditis elegans
Exon247521   173   X: 9931113-9931285 Caenorhabditis elegans
Exon247523   128   X: 9931333-9931460 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C17G1.4a.1 9925728 9931460 -1

1 Sequence

Length
3402

1 Sequence Ontology Term

Identifier Name Description
transcript