WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C17G1.4b.1 Sequence Name  C17G1.4b.1
Length (nt)  3269   Chromosome Location  X: 9925873-9931462
Chromosome . Primary Identifier  X Chromosome Location . Start  9925873
Chromosome Location . End  9931462 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C17G1.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007651 nra-3 C17G1.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C17G1.4b C17G1.4b 2658   X: 9926918-9927024

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C17G1.4b.1 9925873 9931462 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon247508   522   X: 9925873-9926394 Caenorhabditis elegans
Exon247510   186   X: 9926839-9927024 Caenorhabditis elegans
Exon247512   357   X: 9927069-9927425 Caenorhabditis elegans
Exon247514   214   X: 9927480-9927693 Caenorhabditis elegans
Exon247516   87   X: 9928441-9928527 Caenorhabditis elegans
Exon247518   441   X: 9928572-9929012 Caenorhabditis elegans
Exon247520   1159   X: 9929903-9931061 Caenorhabditis elegans
Exon247522   173   X: 9931113-9931285 Caenorhabditis elegans
Exon247524   130   X: 9931333-9931462 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C17G1.4b.1 9925873 9931462 -1

1 Sequence

Length
3269

1 Sequence Ontology Term

Identifier Name Description
transcript