WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C17G1.5.1 Sequence Name  C17G1.5.1
Length (nt)  1666   Chromosome Location  X: 9938802-9944838
Chromosome . Primary Identifier  X Chromosome Location . Start  9938802
Chromosome Location . End  9944838 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C17G1.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007652 C17G1.5 C17G1.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C17G1.5 C17G1.5 846   X: 9941760-9941861

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C17G1.5.1 9938802 9944838 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon247548   138   X: 9938802-9938939 Caenorhabditis elegans
Exon247551   286   X: 9941328-9941613 Caenorhabditis elegans
Exon247553   128   X: 9941734-9941861 Caenorhabditis elegans
Exon247554   229   X: 9942496-9942724 Caenorhabditis elegans
Exon247556   168   X: 9943186-9943353 Caenorhabditis elegans
Exon247558   108   X: 9943407-9943514 Caenorhabditis elegans
Exon247560   91   X: 9943565-9943655 Caenorhabditis elegans
Exon247562   518   X: 9944321-9944838 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C17G1.5.1 9938802 9944838 1

1 Sequence

Length
1666

1 Sequence Ontology Term

Identifier Name Description
transcript