WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C17G1.5.2 Sequence Name  C17G1.5.2
Length (nt)  1383   Chromosome Location  X: 9941630-9944875
Chromosome . Primary Identifier  X Chromosome Location . Start  9941630
Chromosome Location . End  9944875 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C17G1.5.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007652 C17G1.5 C17G1.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C17G1.5 C17G1.5 846   X: 9941760-9941861

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C17G1.5.2 9941630 9944875 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon247552   232   X: 9941630-9941861 Caenorhabditis elegans
Exon247555   229   X: 9942496-9942724 Caenorhabditis elegans
Exon247557   168   X: 9943186-9943353 Caenorhabditis elegans
Exon247559   108   X: 9943407-9943514 Caenorhabditis elegans
Exon247561   91   X: 9943565-9943655 Caenorhabditis elegans
Exon247563   555   X: 9944321-9944875 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C17G1.5.2 9941630 9944875 1

1 Sequence

Length
1383

1 Sequence Ontology Term

Identifier Name Description
transcript